Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccl11 | Ccl24 | ENSMOCP00000003948 | ENSMOCP00000025100 | Eotaxin. | C-C motif chemokine ligand 24. | 0.855 |
Ccl11 | Ccl26 | ENSMOCP00000003948 | ENSMOCP00000026215 | Eotaxin. | C-C motif chemokine ligand 26. | 0.984 |
Ccl11 | Ccl5 | ENSMOCP00000003948 | ENSMOCP00000023767 | Eotaxin. | C-C motif chemokine ligand 5. | 0.977 |
Ccl11 | Ccl8 | ENSMOCP00000003948 | ENSMOCP00000007088 | Eotaxin. | C-C motif chemokine 8. | 0.756 |
Ccl11 | Ccr10 | ENSMOCP00000003948 | ENSMOCP00000009190 | Eotaxin. | Chemokine (C-C motif) receptor 10. | 0.861 |
Ccl11 | Cxcl12 | ENSMOCP00000003948 | ENSMOCP00000019290 | Eotaxin. | C-X-C motif chemokine ligand 12. | 0.950 |
Ccl11 | Cxcl13 | ENSMOCP00000003948 | ENSMOCP00000025314 | Eotaxin. | C-X-C motif chemokine ligand 13. | 0.735 |
Ccl11 | ENSMOCP00000025974 | ENSMOCP00000003948 | ENSMOCP00000025974 | Eotaxin. | annotation not available | 0.978 |
Ccl11 | Pf4 | ENSMOCP00000003948 | ENSMOCP00000016013 | Eotaxin. | Platelet factor 4. | 0.823 |
Ccl12 | Ccl24 | ENSMOCP00000009008 | ENSMOCP00000025100 | C-C motif chemokine 12-like. | C-C motif chemokine ligand 24. | 0.809 |
Ccl12 | Ccl26 | ENSMOCP00000009008 | ENSMOCP00000026215 | C-C motif chemokine 12-like. | C-C motif chemokine ligand 26. | 0.971 |
Ccl12 | Ccl5 | ENSMOCP00000009008 | ENSMOCP00000023767 | C-C motif chemokine 12-like. | C-C motif chemokine ligand 5. | 0.971 |
Ccl12 | Ccl8 | ENSMOCP00000009008 | ENSMOCP00000007088 | C-C motif chemokine 12-like. | C-C motif chemokine 8. | 0.753 |
Ccl12 | Ccr10 | ENSMOCP00000009008 | ENSMOCP00000009190 | C-C motif chemokine 12-like. | Chemokine (C-C motif) receptor 10. | 0.804 |
Ccl12 | Cxcl12 | ENSMOCP00000009008 | ENSMOCP00000019290 | C-C motif chemokine 12-like. | C-X-C motif chemokine ligand 12. | 0.930 |
Ccl12 | Cxcl13 | ENSMOCP00000009008 | ENSMOCP00000025314 | C-C motif chemokine 12-like. | C-X-C motif chemokine ligand 13. | 0.735 |
Ccl12 | ENSMOCP00000025974 | ENSMOCP00000009008 | ENSMOCP00000025974 | C-C motif chemokine 12-like. | annotation not available | 0.973 |
Ccl12 | Pf4 | ENSMOCP00000009008 | ENSMOCP00000016013 | C-C motif chemokine 12-like. | Platelet factor 4. | 0.787 |
Ccl24 | Ccl11 | ENSMOCP00000025100 | ENSMOCP00000003948 | C-C motif chemokine ligand 24. | Eotaxin. | 0.855 |
Ccl24 | Ccl12 | ENSMOCP00000025100 | ENSMOCP00000009008 | C-C motif chemokine ligand 24. | C-C motif chemokine 12-like. | 0.809 |
page 1 of 6