Nfib protein (Microtus ochrogaster) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

Nfib

Nuclear factor I B. (570 aa)

Predicted Functional Partners:

Nfix

0.753

Nfic

0.728

Nfia

0.687

Gata4

0.613

Gata6

0.474

Sox2

0.457

Nf1

0.431

Mycn

0.426

Gata2

0.420

Sox1

0.416

Your Current Organism:

Microtus ochrogaster

NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gata2	Gata4	ENSMOCP00000009968	ENSMOCP00000022010	GATA binding protein 2.	GATA binding protein 4.	0.591
Gata2	Gata6	ENSMOCP00000009968	ENSMOCP00000006327	GATA binding protein 2.	GATA binding protein 6.	0.591
Gata2	Nfib	ENSMOCP00000009968	ENSMOCP00000026067	GATA binding protein 2.	Nuclear factor I B.	0.420
Gata2	Nfic	ENSMOCP00000009968	ENSMOCP00000024843	GATA binding protein 2.	Nuclear factor I C.	0.452
Gata2	Nfix	ENSMOCP00000009968	ENSMOCP00000003320	GATA binding protein 2.	Nuclear factor I X.	0.415
Gata2	Sox2	ENSMOCP00000009968	ENSMOCP00000008226	GATA binding protein 2.	SRY-box transcription factor 2.	0.476
Gata4	Gata2	ENSMOCP00000022010	ENSMOCP00000009968	GATA binding protein 4.	GATA binding protein 2.	0.591
Gata4	Gata6	ENSMOCP00000022010	ENSMOCP00000006327	GATA binding protein 4.	GATA binding protein 6.	0.420
Gata4	Nfia	ENSMOCP00000022010	ENSMOCP00000007848	GATA binding protein 4.	Nuclear factor I A.	0.621
Gata4	Nfib	ENSMOCP00000022010	ENSMOCP00000026067	GATA binding protein 4.	Nuclear factor I B.	0.613
Gata4	Nfic	ENSMOCP00000022010	ENSMOCP00000024843	GATA binding protein 4.	Nuclear factor I C.	0.621
Gata4	Nfix	ENSMOCP00000022010	ENSMOCP00000003320	GATA binding protein 4.	Nuclear factor I X.	0.634
Gata4	Sox1	ENSMOCP00000022010	ENSMOCP00000004528	GATA binding protein 4.	SRY-box transcription factor 1.	0.530
Gata4	Sox2	ENSMOCP00000022010	ENSMOCP00000008226	GATA binding protein 4.	SRY-box transcription factor 2.	0.508
Gata6	Gata2	ENSMOCP00000006327	ENSMOCP00000009968	GATA binding protein 6.	GATA binding protein 2.	0.591
Gata6	Gata4	ENSMOCP00000006327	ENSMOCP00000022010	GATA binding protein 6.	GATA binding protein 4.	0.420
Gata6	Nf1	ENSMOCP00000006327	ENSMOCP00000014128	GATA binding protein 6.	Neurofibromin 1.	0.439
Gata6	Nfia	ENSMOCP00000006327	ENSMOCP00000007848	GATA binding protein 6.	Nuclear factor I A.	0.589
Gata6	Nfib	ENSMOCP00000006327	ENSMOCP00000026067	GATA binding protein 6.	Nuclear factor I B.	0.474
Gata6	Nfic	ENSMOCP00000006327	ENSMOCP00000024843	GATA binding protein 6.	Nuclear factor I C.	0.588