STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000026191annotation not available (89 aa)    
Predicted Functional Partners:
Emg1
EMG1 N1-specific pseudouridine methyltransferase.
   
 0.984
Utp3
UTP3 small subunit processome component.
   
 0.982
Utp11
UTP11 small subunit processome component.
   
 0.982
Krr1
KRR1 small subunit processome component homolog.
   
 0.980
Imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.978
Rcl1
RNA terminal phosphate cyclase like 1.
   
 0.977
Ngdn
Neuroguidin.
   
 0.976
Rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.970
Utp6
UTP6 small subunit processome component.
   
 0.970
Nop58
NOP58 ribonucleoprotein.
   
 0.969
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.