STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgals9Galectin 9. (300 aa)    
Predicted Functional Partners:
ENSMOCP00000020247
annotation not available
    
 0.895
Usp18
Ubiquitin specific peptidase 18.
   
  
 0.801
ENSMOCP00000024160
annotation not available
   
 
 0.727
Lgals3
Galectin 3.
  
 
 
0.724
Cd44
CD44 molecule (Indian blood group).
   
 
 0.690
Pbk
PDZ binding kinase.
    
   0.674
Cd4
CD4 molecule.
    
 0.654
Ptprc
Protein tyrosine phosphatase, receptor type, C.
   
 
 0.637
Rragc
Ras related GTP binding C.
    
   0.608
Pdcd1
Programmed cell death 1.
      
 0.607
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.