STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Reep4Receptor accessory protein 4. (257 aa)    
Predicted Functional Partners:
Reep2
Receptor accessory protein 2.
  
 
 
0.654
Atl1
Atlastin GTPase 1.
    
 
 0.639
Reep1
Receptor accessory protein 1.
  
 
 
0.634
Atl3
Atlastin GTPase 3.
    
 
 0.580
Ribc2
RIB43A domain with coiled-coils 2.
   
 
 0.543
Nemp1
Nuclear envelope integral membrane protein 1.
      
 0.541
Ccdc150
Coiled-coil domain containing 150.
      
 0.539
Rtn3
Reticulon 3.
   
 
 0.517
Rtn4
Reticulon 4.
   
 
 0.503
Rtn1
Reticulon 1.
   
 
 0.503
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.