STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Camta1Calmodulin binding transcription activator 1. (1667 aa)    
Predicted Functional Partners:
Fam192a
Proteasome activator subunit 3 interacting protein 1.
    
 
 0.672
Rims2
Regulating synaptic membrane exocytosis 2.
   
  
 0.447
Coq4
Coenzyme Q4.
      
 0.438
Psme3
Proteasome activator subunit 3.
    
   0.412
ENSMOCP00000020462
annotation not available
    
   0.412
Chd5
Chromodomain helicase DNA binding protein 5.
      
 0.405
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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