STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankrd13cAnkyrin repeat domain 13C. (543 aa)    
Predicted Functional Partners:
Myo9b
Myosin IXB.
     
 0.674
Myo9a
Myosin IXA.
     
 0.650
ENSMOCP00000000250
annotation not available
    
   0.621
LOC101983222
Ubiquitin.
    
   0.621
Kxd1
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.621
Rtp4
Receptor transporter protein 4.
      
 0.539
Arhgap29
Rho GTPase activating protein 29.
     
 0.437
Arhgap45
Rho GTPase activating protein 45.
     
 0.412
Ptgdr
Prostaglandin D2 receptor.
    
   0.410
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.