STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RilpRab interacting lysosomal protein. (367 aa)    
Predicted Functional Partners:
Rab7a
RAB7A, member RAS oncogene family.
    
 0.989
ENSMOCP00000021564
annotation not available
    
 0.989
Rab7b
RAB7B, member RAS oncogene family.
    
 0.889
Dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
     
 0.846
Dync1li1
Dynein cytoplasmic 1 light intermediate chain 1.
     
 0.846
Dync1h1
Dynein cytoplasmic 1 heavy chain 1.
     
 0.837
Osbpl1a
Oxysterol binding protein like 1A.
   
 0.766
ENSMOCP00000026368
annotation not available
   
 0.766
Rab9b
RAB9B, member RAS oncogene family.
    
 0.751
Rab9
RAB9A, member RAS oncogene family.
    
 0.751
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.