STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SqleSqualene epoxidase. (573 aa)    
Predicted Functional Partners:
Ch25h
Cholesterol 25-hydroxylase.
   
 0.994
Msmo1
Methylsterol monooxygenase 1.
   
 0.994
Gm12248
Fatty acid hydroxylase domain containing 2.
   
 0.994
Lss
Lanosterol synthase.
 
 
 0.991
Cyp51
Lanosterol 14-alpha demethylase.
 
 0.990
Nsdhl
NAD(P) dependent steroid dehydrogenase-like.
   
 
 0.987
Sigmar1
Sigma non-opioid intracellular receptor 1.
   
 
 0.983
Dhcr7
7-dehydrocholesterol reductase.
   
 
 0.982
Tm7sf2
Transmembrane 7 superfamily member 2.
   
 
 0.974
LOC101980803
Squalene synthase.
 
 
 0.972
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.