A0A137P6S8 protein (Conidiobolus coronatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A137P6S8

P-loop containing nucleoside triphosphate hydrolase protein. (1079 aa)

Predicted Functional Partners:

A0A137PAZ3

0.997

A0A137PHN6

0.996

A0A137PEC1

0.995

A0A137PHU3

0.995

A0A137P2F8

0.993

A0A137P793

0.988

A0A137PA29

0.986

A0A137PF56

0.985

A0A137PJ95

0.982

A0A137PGR1

0.981

Your Current Organism:

Conidiobolus coronatus

NCBI taxonomy Id: 796925
Other names: C. coronatus NRRL 28638, Conidiobolus coronatus NRRL 28638

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A137P2F8	A0A137P6S8	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	P-loop containing nucleoside triphosphate hydrolase protein.	0.993
A0A137P2F8	A0A137P793	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	P-loop containing nucleoside triphosphate hydrolase protein.	0.967
A0A137P2F8	A0A137PA29	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Uncharacterized protein.	0.782
A0A137P2F8	A0A137PAZ3	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	L domain-like protein.	0.996
A0A137P2F8	A0A137PEC1	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Uncharacterized protein.	0.987
A0A137P2F8	A0A137PF56	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	DUF382-domain-containing protein.	0.994
A0A137P2F8	A0A137PGR1	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	RNA-binding domain-containing protein.	0.962
A0A137P2F8	A0A137PHN6	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	ARM repeat-containing protein.	0.975
A0A137P2F8	A0A137PHU3	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Splicing factor 3A subunit 3-like protein.	0.995
A0A137P2F8	A0A137PJ95	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Uncharacterized protein.	0.981
A0A137P6S8	A0A137P2F8	P-loop containing nucleoside triphosphate hydrolase protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.993
A0A137P6S8	A0A137P793	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.988
A0A137P6S8	A0A137PA29	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.986
A0A137P6S8	A0A137PAZ3	P-loop containing nucleoside triphosphate hydrolase protein.	L domain-like protein.	0.997
A0A137P6S8	A0A137PEC1	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.995
A0A137P6S8	A0A137PF56	P-loop containing nucleoside triphosphate hydrolase protein.	DUF382-domain-containing protein.	0.985
A0A137P6S8	A0A137PGR1	P-loop containing nucleoside triphosphate hydrolase protein.	RNA-binding domain-containing protein.	0.981
A0A137P6S8	A0A137PHN6	P-loop containing nucleoside triphosphate hydrolase protein.	ARM repeat-containing protein.	0.996
A0A137P6S8	A0A137PHU3	P-loop containing nucleoside triphosphate hydrolase protein.	Splicing factor 3A subunit 3-like protein.	0.995
A0A137P6S8	A0A137PJ95	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.982