A0A137PC58 protein (Conidiobolus coronatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A137PC58

WD40 repeat-like protein. (584 aa)

Predicted Functional Partners:

A0A137NST4

0.870

A0A137NSY5

0.870

A0A137P262

0.787

A0A137PJ49

0.707

A0A137P0C0

0.670

A0A137P083

0.646

A0A137P1S4

0.638

A0A137P917

0.628

A0A137P722

0.625

A0A137NUA7

0.624

Your Current Organism:

Conidiobolus coronatus

NCBI taxonomy Id: 796925
Other names: C. coronatus NRRL 28638, Conidiobolus coronatus NRRL 28638

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A137NST4	A0A137NSY5	Uncharacterized protein.	CPSF_A domain-containing protein.	0.571
A0A137NST4	A0A137NUA7	Uncharacterized protein.	ThiF family protein.	0.644
A0A137NST4	A0A137P083	Uncharacterized protein.	ARM repeat-containing protein.	0.738
A0A137NST4	A0A137P0C0	Uncharacterized protein.	WD40 repeat-like protein.	0.898
A0A137NST4	A0A137P1S4	Uncharacterized protein.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.655
A0A137NST4	A0A137P262	Uncharacterized protein.	Cullin-domain-containing protein; Belongs to the cullin family.	0.975
A0A137NST4	A0A137P722	Uncharacterized protein.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.512
A0A137NST4	A0A137P917	Uncharacterized protein.	NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.	0.639
A0A137NST4	A0A137PC58	Uncharacterized protein.	WD40 repeat-like protein.	0.870
A0A137NST4	A0A137PJ49	Uncharacterized protein.	RING-type domain-containing protein.	0.939
A0A137NSY5	A0A137NST4	CPSF_A domain-containing protein.	Uncharacterized protein.	0.571
A0A137NSY5	A0A137NUA7	CPSF_A domain-containing protein.	ThiF family protein.	0.644
A0A137NSY5	A0A137P083	CPSF_A domain-containing protein.	ARM repeat-containing protein.	0.738
A0A137NSY5	A0A137P0C0	CPSF_A domain-containing protein.	WD40 repeat-like protein.	0.898
A0A137NSY5	A0A137P1S4	CPSF_A domain-containing protein.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.655
A0A137NSY5	A0A137P262	CPSF_A domain-containing protein.	Cullin-domain-containing protein; Belongs to the cullin family.	0.979
A0A137NSY5	A0A137P722	CPSF_A domain-containing protein.	Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.	0.512
A0A137NSY5	A0A137P917	CPSF_A domain-containing protein.	NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.	0.639
A0A137NSY5	A0A137PC58	CPSF_A domain-containing protein.	WD40 repeat-like protein.	0.870
A0A137NSY5	A0A137PJ49	CPSF_A domain-containing protein.	RING-type domain-containing protein.	0.939