STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A137PDK7Ribosome biogenesis ATPase RIX7. (750 aa)    
Predicted Functional Partners:
A0A137PF52
Antiviral helicase.
   
 0.921
A0A137NWV8
RNA-binding domain-containing protein.
   
  
 0.913
A0A137P7Y2
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.905
A0A137PFZ0
ARM repeat-containing protein.
   
    0.894
A0A137P9J4
Uncharacterized protein.
   
 0.881
A0A137NVU4
Polyubiquitin-tagged protein recognition complex, Npl4 component.
    
 0.878
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.868
A0A137NXB9
Uncharacterized protein.
   
 0.848
A0A137P276
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.844
A0A137NZE8
NOC3p-domain-containing protein.
   
  
 0.843
Your Current Organism:
Conidiobolus coronatus
NCBI taxonomy Id: 796925
Other names: C. coronatus NRRL 28638, Conidiobolus coronatus NRRL 28638
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