STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A137PEJ6Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (446 aa)    
Predicted Functional Partners:
A0A137PG59
Spermine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.835
A0A137NRF2
Aspartate-semialdehyde dehydrogenase.
  
 
 0.823
A0A137PBI8
Arginase; Belongs to the arginase family.
  
 
 0.821
A0A137P6U5
Argininosuccinate synthase.
  
 
 0.776
A0A137NWZ1
Homoserine dehydrogenase.
  
 
 0.746
A0A137P458
Argininosuccinate lyase.
  
 
 0.740
A0A137P1T8
Aspartokinase.
    
 0.735
A0A137PDV7
Uncharacterized protein.
    
 0.735
A0A137PJC0
Biotin synthase.
    
 0.734
A0A137P1W9
Ornithine aminotransferase.
    
 0.722
Your Current Organism:
Conidiobolus coronatus
NCBI taxonomy Id: 796925
Other names: C. coronatus NRRL 28638, Conidiobolus coronatus NRRL 28638
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