STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL15292.1Hypothetical protein. (539 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) domain-containing protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.995
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
  
 
  0.934
EHL18436.1
Calcium-translocating P-type ATPase, PMCA-type.
    
  0.932
EHL15358.1
Hypothetical protein; Belongs to the V-ATPase proteolipid subunit family.
    
 0.927
EHL14588.1
Hypothetical protein; Belongs to the V-ATPase proteolipid subunit family.
    
 0.927
EHL18338.1
Hypothetical protein.
    
 0.911
EHL15359.1
Hypothetical protein; Belongs to the V-ATPase 116 kDa subunit family.
    
  0.891
EHL14589.1
Hypothetical protein; Belongs to the V-ATPase 116 kDa subunit family.
    
  0.891
EHL18164.1
HAD hydrolase, family IA.
    
  0.891
EHL15357.1
Hypothetical protein.
   
 
  0.890
Your Current Organism:
Peptoanaerobacter stomatis
NCBI taxonomy Id: 796937
Other names: ATCC BAA-2665, DSM 28705, HM-483, P. stomatis, Peptoanaerobacter stomatis Sizova et al. 2016, Peptostreptococcaceae bacterium ACC19a, Peptostreptococcaceae bacterium CM2, Peptostreptococcaceae bacterium CM5, Peptostreptococcaceae bacterium OBRC8, strain ACC19a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.