STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL18173.1Hypothetical protein. (215 aa)    
Predicted Functional Partners:
EHL18174.1
Hypothetical protein.
 
 0.980
EHL17210.1
Hypothetical protein.
 
 0.965
EHL17236.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.924
EHL18544.1
Hypothetical protein.
  
 0.832
EHL18170.1
Signal peptidase I.
 
     0.816
EHL16659.1
Hypothetical protein.
 
 0.814
EHL17278.1
Flagellar motor switch protein FliN.
  
 
  0.743
EHL18172.1
Hypothetical protein.
       0.605
EHL18171.1
Hypothetical protein.
       0.582
EJZ44358.1
Hypothetical protein.
       0.582
Your Current Organism:
Peptoanaerobacter stomatis
NCBI taxonomy Id: 796937
Other names: ATCC BAA-2665, DSM 28705, HM-483, P. stomatis, Peptoanaerobacter stomatis Sizova et al. 2016, Peptostreptococcaceae bacterium ACC19a, Peptostreptococcaceae bacterium CM2, Peptostreptococcaceae bacterium CM5, Peptostreptococcaceae bacterium OBRC8, strain ACC19a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.