STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL17785.1Hydrogenase maturation GTPase HydF. (394 aa)    
Predicted Functional Partners:
EHL17786.1
Iron-only hydrogenase maturation rSAM protein HydG.
   
 0.992
EHL17787.1
Iron-only hydrogenase maturation rSAM protein HydE.
   
 0.971
EHL17788.1
Hypothetical protein.
 
   
 0.928
EHL17736.1
Hydrogenase, Fe-only.
 
   
 0.848
gpsA
Hypothetical protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.837
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
   
    0.799
cmk
Cytidylate kinase.
  
  
 0.750
EHL14812.1
GTP-binding protein TypA/BipA.
   
  
 0.747
EHL14834.1
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.718
EHL14699.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.645
Your Current Organism:
Peptoanaerobacter stomatis
NCBI taxonomy Id: 796937
Other names: ATCC BAA-2665, DSM 28705, HM-483, P. stomatis, Peptoanaerobacter stomatis Sizova et al. 2016, Peptostreptococcaceae bacterium ACC19a, Peptostreptococcaceae bacterium CM2, Peptostreptococcaceae bacterium CM5, Peptostreptococcaceae bacterium OBRC8, strain ACC19a
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