STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO18074.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.842
EHO18075.1
Hypothetical protein.
       0.842
EHO18072.1
Putative dGTPase; Belongs to the dGTPase family. Type 2 subfamily.
       0.774
EHO17124.1
Hypothetical protein; Belongs to the UPF0297 family.
  
     0.759
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.681
EHO18623.1
Sigma-70 family RNA polymerase sigma factor; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.660
EHO18055.1
Hypothetical protein.
  
     0.655
EHO18146.1
Hypothetical protein.
  
     0.625
EHO15988.1
Hypothetical protein.
 
     0.595
EHO17711.1
Helicase-exonuclease AddAB, AddB subunit; ATP-dependent DNA helicase.
 
     0.583
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.