STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO18135.1Rod shape-determining protein MreD. (170 aa)    
Predicted Functional Partners:
EHO18136.1
Rod shape-determining protein MreC.
 
 
 0.995
EHO18134.1
Hypothetical protein.
 
  
 0.958
EHO18137.1
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.866
EHO18129.1
Hypothetical protein.
 
     0.832
EHO18133.1
Hypothetical protein; Belongs to the SEDS family.
 
  
 0.812
EHO17005.1
Hypothetical protein.
 
     0.770
EHO15718.1
Hypothetical protein.
  
     0.764
EHO16492.1
Hypothetical protein.
  
     0.759
EHO16075.1
Hypothetical protein.
  
     0.757
EHO16544.1
Hypothetical protein.
  
     0.755
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.