STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO17658.1L-serine dehydratase, iron-sulfur-dependent, alpha subunit. (293 aa)    
Predicted Functional Partners:
EHO17659.1
L-serine dehydratase, iron-sulfur-dependent, beta subunit.
 
 0.999
EHO18621.1
Threonine dehydratase.
  
 
 0.919
EHO15887.1
Phosphoserine phosphatase/homoserine phosphotransferase.
   
 
 0.911
EHO16095.1
Hypothetical protein.
   
 
  0.907
EHO17372.1
Serine O-acetyltransferase.
     
 0.905
EHO17629.1
Hypothetical protein.
    
  0.904
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
     
 0.901
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
   
 
  0.900
EHO17657.1
Hypothetical protein.
       0.631
EHO17660.1
Hypothetical protein.
       0.473
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.