STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO16993.1Hypothetical protein. (1157 aa)    
Predicted Functional Partners:
EHO16994.1
Hypothetical protein.
 
    0.958
EHO16996.1
Hypothetical protein.
 
    0.943
EHO16995.1
Hypothetical protein.
 
    0.938
EHO18588.1
TIGR02688 family protein.
 
    0.882
EHO16988.1
TIGR02687 family protein.
 
     0.879
EHO18585.1
Hypothetical protein.
 
    0.852
EHO18583.1
Hypothetical protein.
 
    0.827
EHO18584.1
Hypothetical protein.
 
    0.808
EHO18587.1
TIGR02687 family protein.
 
     0.792
EHO16997.1
Hypothetical protein.
       0.666
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.