Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHO15610.1 | EHO17018.1 | HMPREF9623_01931 | HMPREF9623_00617 | Hypothetical protein. | Hypothetical protein. | 0.770 |
| EHO17018.1 | EHO15610.1 | HMPREF9623_00617 | HMPREF9623_01931 | Hypothetical protein. | Hypothetical protein. | 0.770 |
| EHO17018.1 | EHO17019.1 | HMPREF9623_00617 | HMPREF9623_00618 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| EHO17018.1 | EHO17079.1 | HMPREF9623_00617 | HMPREF9623_00678 | Hypothetical protein. | Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.716 |
| EHO17018.1 | clpP | HMPREF9623_00617 | HMPREF9623_00615 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.508 |
| EHO17018.1 | clpX | HMPREF9623_00617 | HMPREF9623_00614 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.470 |
| EHO17018.1 | tig | HMPREF9623_00617 | HMPREF9623_00616 | Hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.533 |
| EHO17019.1 | EHO17018.1 | HMPREF9623_00618 | HMPREF9623_00617 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| EHO17019.1 | clpP | HMPREF9623_00618 | HMPREF9623_00615 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.508 |
| EHO17019.1 | clpX | HMPREF9623_00618 | HMPREF9623_00614 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.470 |
| EHO17019.1 | tig | HMPREF9623_00618 | HMPREF9623_00616 | Hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.533 |
| EHO17079.1 | EHO17018.1 | HMPREF9623_00678 | HMPREF9623_00617 | Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Hypothetical protein. | 0.716 |
| clpP | EHO17018.1 | HMPREF9623_00615 | HMPREF9623_00617 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Hypothetical protein. | 0.508 |
| clpP | EHO17019.1 | HMPREF9623_00615 | HMPREF9623_00618 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Hypothetical protein. | 0.508 |
| clpP | clpX | HMPREF9623_00615 | HMPREF9623_00614 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.999 |
| clpP | tig | HMPREF9623_00615 | HMPREF9623_00616 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.901 |
| clpX | EHO17018.1 | HMPREF9623_00614 | HMPREF9623_00617 | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Hypothetical protein. | 0.470 |
| clpX | EHO17019.1 | HMPREF9623_00614 | HMPREF9623_00618 | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Hypothetical protein. | 0.470 |
| clpX | clpP | HMPREF9623_00614 | HMPREF9623_00615 | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.999 |
| clpX | tig | HMPREF9623_00614 | HMPREF9623_00616 | ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.871 |
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