STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNHypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (337 aa)    
Predicted Functional Partners:
EHO17059.1
YaeC family lipoprotein; Belongs to the nlpA lipoprotein family.
 0.999
EHO17060.1
Hypothetical protein.
 0.999
EHO18186.1
Methionine synthase.
   
 
 0.907
EHO16541.1
Hypothetical protein.
 
      0.900
EHO17258.1
Hypothetical protein.
 
     
0.898
EHO15618.1
Hypothetical protein.
   
  0.896
EHO15886.1
Hypothetical protein.
 
     
0.888
EHO18644.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
    0.886
EHO18607.1
Hypothetical protein.
 
     
0.873
EHO17413.1
Hypothetical protein.
     
0.862
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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