STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO17229.1(R)-2-hydroxyglutaryl-CoA dehydratase subunit alpha. (495 aa)    
Predicted Functional Partners:
EHO17228.1
benzoyl-CoA reductase, subunit C.
 
 
 0.999
EHO17230.1
Putative CoA-substrate-specific enzyme activase.
 
 0.996
EHO17233.1
Hypothetical protein.
 
  
  0.964
EHO17232.1
Glutaconate CoA-transferase subunit B.
 
  
  0.963
EHO17231.1
Hypothetical protein.
 
     0.866
EHO17313.1
Hypothetical protein.
    
 0.795
EHO17226.1
Putative CoA-substrate-specific enzyme activase.
  
 0.747
EHO15773.1
Hypothetical protein; Belongs to the CoA-transferase III family.
 
     0.408
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.