STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO17258.1Hypothetical protein. (597 aa)    
Predicted Functional Partners:
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.899
metN
Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.898
EHO15751.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
   
 
0.874
ecfA
Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.856
EHO17257.1
Hypothetical protein.
 
    
0.814
EHO15620.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily.
 
   
 
0.777
EHO17256.1
Hypothetical protein.
       0.773
EHO16666.1
Hypothetical protein.
  
  
  0.704
EHO16667.1
Hypothetical protein.
  
     0.667
EHO18609.1
Hypothetical protein.
  
  
  0.646
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.