STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO17372.1Serine O-acetyltransferase. (220 aa)    
Predicted Functional Partners:
EHO17139.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.998
cysS
cysteine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.993
EHO17174.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.951
EHO16095.1
Hypothetical protein.
  
  
 0.928
EHO15887.1
Phosphoserine phosphatase/homoserine phosphotransferase.
    
 0.923
EHO17658.1
L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
     
 0.905
EHO17659.1
L-serine dehydratase, iron-sulfur-dependent, beta subunit.
     
 0.905
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.904
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.904
EHO18621.1
Threonine dehydratase.
    
 0.903
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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