STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO17397.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
EHO17401.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
    
 0.899
EHO17477.1
Exodeoxyribonuclease III (xth).
  
 
 0.794
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.773
EHO17579.1
Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
      0.731
EHO15880.1
Hypothetical protein.
      0.666
EHO17150.1
Small GTP-binding protein domain protein.
 
      0.602
EHO17398.1
Branched-chain amino acid aminotransferase.
       0.548
EHO17399.1
Fructose-1,6-bisphosphate aldolase, class II.
       0.463
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
 
  0.437
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.