STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO17497.1Amidohydrolase. (393 aa)    
Predicted Functional Partners:
EHO17498.1
MATE efflux family protein.
  
    0.775
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
    
 0.662
EHO17496.1
Hypothetical protein.
       0.551
EHO17494.1
Hypothetical protein.
       0.527
EHO17495.1
Hypothetical protein.
  
    0.527
EHO17493.1
Hypothetical protein.
  
    0.520
EHO17499.1
Hypothetical protein.
       0.512
EHO17062.1
Putative dipeptidase.
    
 0.506
EHO17501.1
Hypothetical protein.
    
  0.402
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.