STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO16506.1Hypothetical protein. (599 aa)    
Predicted Functional Partners:
EHO16478.1
Hypothetical protein.
 
   
 0.902
EHO16505.1
Hypothetical protein.
 
     0.861
EHO16504.1
Hypothetical protein.
 
    0.820
EHO16481.1
Betaine/carnitine/choline transporter (BCCT) family transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.770
EHO16459.1
Hypothetical protein.
 
     0.760
EHO17417.1
Hypothetical protein.
 
     0.748
EHO17183.1
Hypothetical protein.
 
     0.746
EHO16507.1
Hypothetical protein.
 
     0.739
EHO16466.1
Hypothetical protein.
 
  
 0.735
EHO15738.1
Hypothetical protein.
  
     0.721
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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