STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO16544.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
EHO16543.1
Hypothetical protein.
 
    0.936
EHO18180.1
Hypothetical protein.
  
     0.763
EHO17011.1
Hypothetical protein.
  
     0.758
EHO18135.1
Rod shape-determining protein MreD.
  
     0.755
EHO18129.1
Hypothetical protein.
 
     0.754
EHO18181.1
Hypothetical protein.
  
     0.753
EHO15706.1
Hypothetical protein.
  
     0.751
EHO16545.1
Hypothetical protein.
 
     0.750
EHO15767.1
Hypothetical protein.
  
     0.745
EHO15718.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.