STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO16608.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
EHO18580.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.861
EHO16609.1
Hypothetical protein.
       0.842
EHO16610.1
Hypothetical protein.
       0.842
EHO16607.1
Hypothetical protein.
       0.773
EHO18180.1
Hypothetical protein.
  
     0.767
EHO15767.1
Hypothetical protein.
  
     0.766
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.762
EHO17431.1
Preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family.
  
     0.751
EHO17011.1
Hypothetical protein.
  
     0.743
EHO16492.1
Hypothetical protein.
  
     0.742
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.