STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO16639.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
EHO18580.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.968
EHO16640.1
Hypothetical protein.
  
  0.930
EHO16638.1
Hypothetical protein.
 
     0.827
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.800
EHO16641.1
Hypothetical protein.
       0.773
EHO16643.1
Hypothetical protein.
 
  
  0.737
EHO16644.1
Hypothetical protein.
 
     0.707
EHO16642.1
Hypothetical protein.
       0.701
EHO18621.1
Threonine dehydratase.
   
  0.466
EHO16707.1
Hypothetical protein.
  
    0.442
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.