STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO16644.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
EHO16643.1
Hypothetical protein.
       0.755
EHO16639.1
Hypothetical protein.
 
     0.707
EHO16642.1
Hypothetical protein.
       0.689
EHO16640.1
Hypothetical protein.
       0.675
EHO16638.1
Hypothetical protein.
       0.631
EHO16641.1
Hypothetical protein.
       0.627
EHO16632.1
Hypothetical protein.
    
   0.576
EHO16709.1
Hypothetical protein.
    
   0.576
cobB
Hypothetical protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
    
   0.576
EHO16637.1
Hypothetical protein.
 
     0.419
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.