STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO15780.1ParB-like partition protein; Belongs to the ParB family. (314 aa)    
Predicted Functional Partners:
EHO15779.1
Hypothetical protein.
 
   0.973
EHO15627.1
Hypothetical protein.
 
   0.893
EHO17520.1
Hypothetical protein.
 
   0.832
EHO15781.1
Hypothetical protein.
 
     0.811
EHO15782.1
Hypothetical protein.
 
     0.787
EHO15778.1
Hypothetical protein.
       0.741
EHO15700.1
Hypothetical protein.
  
   0.568
rsmG
16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.539
EHO15790.1
Hypothetical protein.
 
     0.508
EHO15788.1
Hypothetical protein.
 
     0.501
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
Server load: low (18%) [HD]