STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO15940.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
EHO15939.1
Hypothetical protein.
 
  
  0.989
EHO15938.1
Hypothetical protein.
 
 
  0.985
EHO15937.1
Hypothetical protein.
 
     0.913
EHO15936.1
Hypothetical protein.
 
     0.837
EHO16772.1
Hypothetical protein.
 
 
  0.824
EHO15833.1
Lantibiotic protection ABC transporter, ATP-binding subunit.
 
 
  0.808
EHO15675.1
Hypothetical protein.
  
     0.555
EHO15643.1
Hypothetical protein.
  
     0.546
EHO16649.1
Hypothetical protein.
  
     0.531
EHO15935.1
Hypothetical protein.
       0.517
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.