STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHO16000.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
EHO16541.1
Hypothetical protein.
 0.995
EHO15998.1
Hypothetical protein.
  0.984
EHO15999.1
Hypothetical protein.
  0.984
EHO16002.1
Hypothetical protein.
 
 0.981
EHO18693.1
Hypothetical protein.
  0.948
EHO15997.1
Hypothetical protein.
 
    0.940
EHO16001.1
Hypothetical protein.
 
     0.914
EHO16763.1
Hypothetical protein.
 
     
0.897
EHO16756.1
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
 
 0.896
EHO15996.1
Hypothetical protein.
 
    0.896
Your Current Organism:
Stomatobaculum longum
NCBI taxonomy Id: 796942
Other names: DSM 24645, Lachnospiraceae bacterium ACC2, S. longum, Stomatobaculum longum Sizova et al. 2013, strain ACC2, strain HM-480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.