STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C475_08321Hypothetical protein; COG3291 FOG: PKD repeat. (1417 aa)    
Predicted Functional Partners:
C475_08326
COG4749 Uncharacterized protein conserved in archaea.
       0.909
C475_16736
Type II secretion system protein E; COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis.
 
     0.861
C475_08316
COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
       0.751
C475_12330
Type II secretion system protein; COG2064 Flp pilus assembly protein TadC.
 
     0.566
C475_16741
Type II secretion system protein; COG2064 Flp pilus assembly protein TadC.
 
     0.557
C475_00907
Type II secretion system F domain protein; COG2064 Flp pilus assembly protein TadC.
 
     0.544
C475_13477
COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
       0.506
C475_08341
TatD-related deoxyribonuclease; COG1831 Predicted metal-dependent hydrolase (urease superfamily).
 
     0.479
C475_10203
Hypothetical protein; COG3291 FOG: PKD repeat.
  
     0.470
C475_16636
Patched family protein; COG1033 Predicted exporters of the RND superfamily.
  
     0.431
Your Current Organism:
Halosimplex carlsbadense
NCBI taxonomy Id: 797114
Other names: H. carlsbadense 2-9-1, Halosimplex carlsbadense 2-9-1, Halosimplex carlsbadense ATCC BAA-75, Halosimplex carlsbadense JCM 11222, Halosimplex carlsbadense str. 2-9-1, Halosimplex carlsbadense strain 2-9-1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.