STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOD2009_09148Unannotated protein. (344 aa)    
Predicted Functional Partners:
ZOD2009_09073
Unannotated protein; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.852
ZOD2009_10550
Unannotated protein; Belongs to the pyruvate kinase family.
   
 
 0.822
ZOD2009_01885
Unannotated protein.
 
 
 0.765
ZOD2009_07234
Unannotated protein.
     
 0.672
ZOD2009_20342
Unannotated protein.
  
 
 0.627
ZOD2009_13526
Unannotated protein.
   
 0.627
ZOD2009_13521
Unannotated protein.
   
 0.627
deoC
Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
 
  0.600
ZOD2009_21507
Unannotated protein.
    
  0.592
ZOD2009_10345
Unannotated protein.
    
 0.580
Your Current Organism:
Haladaptatus paucihalophilus
NCBI taxonomy Id: 797209
Other names: H. paucihalophilus DX253, Haladaptatus paucihalophilus DX253, Haladaptatus paucihalophilus JCM 13897, Haladaptatus paucihalophilus str. DX253, Haladaptatus paucihalophilus strain DX253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.