STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOD2009_08888Unannotated protein. (291 aa)    
Predicted Functional Partners:
ZOD2009_00090
Unannotated protein.
 
  
 0.780
ZOD2009_21462
Unannotated protein.
 
  
 0.742
ZOD2009_21442
Unannotated protein.
  
  
  0.661
ZOD2009_17368
Unannotated protein.
    
  0.584
ZOD2009_13871
Unannotated protein.
    
  0.584
ZOD2009_08883
Unannotated protein.
       0.570
ZOD2009_08878
Unannotated protein.
       0.570
ZOD2009_08873
Unannotated protein.
       0.570
ZOD2009_22042
Unannotated protein.
    
  0.562
ZOD2009_00645
Unannotated protein.
    
  0.562
Your Current Organism:
Haladaptatus paucihalophilus
NCBI taxonomy Id: 797209
Other names: H. paucihalophilus DX253, Haladaptatus paucihalophilus DX253, Haladaptatus paucihalophilus JCM 13897, Haladaptatus paucihalophilus str. DX253, Haladaptatus paucihalophilus strain DX253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.