STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps12PUnannotated protein; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (142 aa)    
Predicted Functional Partners:
rpl44e
Unannotated protein; Binds to the 23S rRNA.
   
 
 0.999
rpl11p
Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.999
rpl1P
Unannotated protein; Binds directly to 23S rRNA. Probably involved in E site tRNA release.
  
 
 0.999
rplP0
Unannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
 
 
 0.999
rpl24e
Unannotated protein; Binds to the 23S rRNA.
   
 
 0.999
rps28e
Unannotated protein; Belongs to the eukaryotic ribosomal protein eS28 family.
   
 0.999
rpl7ae
Unannotated protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
 
 0.999
rpl21e
Unannotated protein; Belongs to the eukaryotic ribosomal protein eL21 family.
   
 
 0.999
rps2P
Unannotated protein; Belongs to the universal ribosomal protein uS2 family.
 
 0.999
rps9p
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
 
 0.999
Your Current Organism:
Haladaptatus paucihalophilus
NCBI taxonomy Id: 797209
Other names: H. paucihalophilus DX253, Haladaptatus paucihalophilus DX253, Haladaptatus paucihalophilus JCM 13897, Haladaptatus paucihalophilus str. DX253, Haladaptatus paucihalophilus strain DX253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.