STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOD2009_10035Unannotated protein. (412 aa)    
Predicted Functional Partners:
ZOD2009_11410
Unannotated protein.
 
  
 0.856
ZOD2009_10550
Unannotated protein; Belongs to the pyruvate kinase family.
     
 0.811
ZOD2009_14516
Unannotated protein.
  
  
 
0.719
menD
Unannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).
    
 0.631
menB
Unannotated protein; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
    
 0.631
ZOD2009_10015
Unannotated protein.
 
  
 0.626
ZOD2009_10030
Unannotated protein.
       0.618
ZOD2009_00680
Unannotated protein.
  
 
 0.591
ZOD2009_06259
Unannotated protein.
  
 
 0.591
ZOD2009_21917
Unannotated protein; Belongs to the carbohydrate kinase PfkB family.
    
 0.578
Your Current Organism:
Haladaptatus paucihalophilus
NCBI taxonomy Id: 797209
Other names: H. paucihalophilus DX253, Haladaptatus paucihalophilus DX253, Haladaptatus paucihalophilus JCM 13897, Haladaptatus paucihalophilus str. DX253, Haladaptatus paucihalophilus strain DX253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.