STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOD2009_17820Unannotated protein. (330 aa)    
Predicted Functional Partners:
ZOD2009_20477
Unannotated protein.
 
  0.661
ZOD2009_18909
Unannotated protein.
  
  0.612
ZOD2009_14451
Unannotated protein.
  
  0.612
ZOD2009_14456
Unannotated protein.
  
  0.612
ZOD2009_13711
Unannotated protein.
  
  0.612
ZOD2009_13306
Unannotated protein.
  
  0.612
ZOD2009_09525
Unannotated protein.
  
  0.612
ZOD2009_09935
Unannotated protein.
  
  0.612
ZOD2009_07344
Unannotated protein.
     
 0.570
ZOD2009_13981
Unannotated protein.
   
 
  0.561
Your Current Organism:
Haladaptatus paucihalophilus
NCBI taxonomy Id: 797209
Other names: H. paucihalophilus DX253, Haladaptatus paucihalophilus DX253, Haladaptatus paucihalophilus JCM 13897, Haladaptatus paucihalophilus str. DX253, Haladaptatus paucihalophilus strain DX253
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