STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOD2009_15191Unannotated protein. (318 aa)    
Predicted Functional Partners:
ZOD2009_15186
Unannotated protein.
 
   
 0.874
ZOD2009_15196
Unannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.798
ZOD2009_15176
Unannotated protein.
 
 
  0.707
ZOD2009_20198
Unannotated protein.
  
     0.675
ZOD2009_20058
Unannotated protein.
  
     0.672
ZOD2009_04667
Unannotated protein.
 
 
 0.663
ZOD2009_15181
Unannotated protein.
       0.634
ZOD2009_18100
Unannotated protein.
  
 
 0.610
hisD
Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
     
 0.557
ZOD2009_04657
Unannotated protein.
 
   
 0.496
Your Current Organism:
Haladaptatus paucihalophilus
NCBI taxonomy Id: 797209
Other names: H. paucihalophilus DX253, Haladaptatus paucihalophilus DX253, Haladaptatus paucihalophilus JCM 13897, Haladaptatus paucihalophilus str. DX253, Haladaptatus paucihalophilus strain DX253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.