Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH35400.1KEGG: htu:Htur_2565 conserved hypothetical protein. (345 aa)    
Predicted Functional Partners:
priS
DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...]
 
   
 0.957
AEH36143.1
PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: htu:Htur_3679 phosphoesterase RecJ domain protein.
  
 
 
 0.873
AEH35401.1
PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: htu:Htur_2567 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
       0.761
pcn
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.
 
  
 0.750
polB
DNA-directed DNA polymerase; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase; Belongs to the DNA polymerase delta/II small subunit family.
  
 
   0.739
AEH35857.1
Peptidase A24B, FlaK domain protein; PFAM: Peptidase A24B, preflagellin, C-terminal; Peptidase A24A, prepilin type IV; KEGG: htu:Htur_0098 peptidase A24A prepilin type IV.
 
     0.682
AEH36450.1
KEGG: nmg:Nmag_1381 hypothetical protein.
  
     0.663
AEH35538.1
PFAM: Protein of unknown function DUF63; KEGG: nmg:Nmag_0688 protein of unknown function DUF63.
  
     0.652
AEH38828.1
PFAM: GCN5-related N-acetyltransferase; KEGG: htu:Htur_1994 GCN5-related N-acetyltransferase.
  
     0.646
AEH35342.1
KEGG: nmg:Nmag_0464 hypothetical protein.
  
     0.641
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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