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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH35443.1KEGG: nmg:Nmag_0721 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. (236 aa)    
Predicted Functional Partners:
AEH35409.1
KEGG: nmg:Nmag_0401 hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase, N-terminal; Hydroxymethylglutaryl-coenzyme A synthase C-terminal.
  
    0.865
AEH36446.1
PFAM: Protein of unknown function DUF373; KEGG: htu:Htur_3336 protein of unknown function DUF373.
 
     0.716
AEH38516.1
PFAM: Protein of unknown function DUF373; KEGG: htu:Htur_1352 protein of unknown function DUF373.
 
     0.714
AEH38060.1
KEGG: nmg:Nmag_0552 hypothetical protein.
  
    0.677
AEH36448.1
PFAM: Radical SAM; KEGG: htu:Htur_3338 radical SAM domain protein.
  
     0.675
carS
UPF0290 protein; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
     0.658
AEH38202.1
tRNA-guanine transglycosylase, various specificities; TIGRFAM: Queuine/other tRNA-ribosyltransferase; Uncharacterised domain 2; PFAM: Pseudouridine synthase/archaeosine transglycosylase; Queuine/other tRNA-ribosyltransferase; KEGG: nmg:Nmag_2683 tRNA-guanine transglycosylase, various specificities; SMART: Pseudouridine synthase/archaeosine transglycosylase.
  
     0.639
AEH35406.1
PFAM: Deoxyribonuclease, TatD-related; KEGG: htu:Htur_2047 TatD-related deoxyribonuclease.
  
     0.633
ribK
Riboflavin kinase; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
 
     0.630
AEH35442.1
Hypothetical protein.
       0.622
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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