Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH35623.1KEGG: htu:Htur_4715 hypothetical protein. (212 aa)    
Predicted Functional Partners:
AEH36505.1
PFAM: Kinetochore-Ndc80 complex, subunit Spc25; KEGG: nmg:Nmag_2908 kinetochore-Ndc80 complex, subunit SPC25.
     
 0.580
AEH35622.1
PFAM: Metallophosphoesterase; KEGG: hla:Hlac_2790 metallophosphoesterase.
       0.488
AEH35624.1
Hypothetical protein.
       0.439
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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