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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH36295.1KEGG: htu:Htur_0591 hypothetical protein. (320 aa)    
Predicted Functional Partners:
AEH38051.1
KEGG: htu:Htur_3503 ABC transporter related protein; PFAM: ABC transporter-like; RNase L inhibitor RLI, possible metal-binding region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SMART: ATPase, AAA+ type, core.
   
 
 0.896
tuf
Translation elongation factor EF-1, subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
   
 0.792
AEH36296.1
KEGG: htu:Htur_0590 hypothetical protein.
       0.685
AEH38534.1
PFAM: Eukaryotic translation initiation factor 2, alpha subunit; Ribosomal protein S1, RNA binding domain; KEGG: htu:Htur_0870 translation initiation factor 2, alpha subunit.
   
 
 0.647
AEH36294.1
PFAM: Protein of unknown function DUF1611; KEGG: htu:Htur_0593 protein of unknown function DUF1611.
       0.641
rps3ae
KEGG: htu:Htur_1398 ribosomal protein S3Ae; HAMAP: 30S ribosomal protein S3Ae; PFAM: Ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.620
rps3
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.614
AEH37594.1
Catalase; KEGG: htu:Htur_1719 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive; ThiJ/PfpI.
  
   0.609
AEH38673.1
Methylase; KEGG: htu:Htur_2394 methylase; TIGRFAM: Putative methylase; PFAM: Methyltransferase type 11.
    
 0.604
rpl31e
KEGG: htu:Htur_0234 ribosomal protein L31e; HAMAP: 50S ribosomal protein L31e; PFAM: Ribosomal protein L31e; Belongs to the ribosomal protein L31e family.
   
  0.595
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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