STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH36552.1KEGG: nmg:Nmag_3075 hypothetical protein. (129 aa)    
Predicted Functional Partners:
AEH36551.1
KEGG: nmg:Nmag_3074 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
       0.526
AEH36198.1
PFAM: Vitamin K epoxide reductase; KEGG: cbd:CBUD_0801 dTDP-glucose 4,6-dehydratase.
  
     0.473
AEH36550.1
PFAM: FRG domain; KEGG: htu:Htur_0609 FRG domain protein.
 
     0.447
AEH38745.1
PFAM: Polyketide cyclase/dehydrase; KEGG: nmg:Nmag_1166 polyketide cyclase/dehydrase.
  
     0.408
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.