STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH36632.1KEGG: nmg:Nmag_1422 uridine kinase; TIGRFAM: Uridine kinase; PFAM: Phosphoribulokinase/uridine kinase. (241 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 0.988
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
 
 
 0.947
AEH37387.1
KEGG: htu:Htur_2461 cytidine deaminase; TIGRFAM: Cytidine deaminase, homotetrameric; PFAM: CMP/dCMP deaminase, zinc-binding.
    
 0.937
AEH36234.1
5'-nucleotidase; KEGG: hma:rrnAC0894 2'3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase, C-terminal.
 
 
 0.928
AEH36543.1
5'-Nucleotidase domain-containing protein; PFAM: 5'-Nucleotidase, C-terminal; KEGG: nmg:Nmag_2272 5'-nucleotidase domain protein.
 
 
 0.928
pyrF
PFAM: Orotidine 5'-phosphate decarboxylase, core; TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 2, core; HAMAP: Orotidine 5'-phosphate decarboxylase; KEGG: htu:Htur_2203 orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
 0.922
AEH37389.1
PFAM: Nucleoside phosphorylase; KEGG: nmg:Nmag_0507 purine or other phosphorylase family 1.
    
 0.921
AEH38605.1
KEGG: htu:Htur_0809 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase.
 
 
  0.921
surE
Multifunctional protein surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.915
cmk
TIGRFAM: Cytidylate kinase, putative; HAMAP: Cytidylate kinase; KEGG: nmg:Nmag_0270 cytidylate kinase; PFAM: Adenylate kinase.
     
  0.900
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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