close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH36635.1PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: nmg:Nmag_1425 succinylglutamate desuccinylase/aspartoacylase. (319 aa)    
Predicted Functional Partners:
AEH36634.1
Threonine synthase; KEGG: htu:Htur_3169 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
       0.844
AEH36271.1
PFAM: ATP-grasp fold, RimK-type; KEGG: htu:Htur_0286 RimK domain protein ATP-grasp.
 
     0.622
AEH36633.1
PFAM: NUDIX hydrolase domain; KEGG: htu:Htur_3170 NUDIX hydrolase.
       0.564
AEH37201.1
KEGG: htu:Htur_0928 alpha-L-glutamate ligase, RimK family; TIGRFAM: S6 modification enzyme RimK; PFAM: ATP-grasp fold, RimK-type; Protein of unknown function DUF785.
 
     0.541
AEH36636.1
PFAM: Protein of unknown function DUF95, transmembrane; KEGG: htu:Htur_3166 protein of unknown function DUF95 transmembrane.
       0.513
AEH36011.1
KEGG: htu:Htur_0328 lysine biosynthesis enzyme LysX; TIGRFAM: Lysine biosynthesis enzyme LysX; S6 modification enzyme RimK; PFAM: ATP-grasp fold, RimK-type.
 
     0.452
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.