Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEH36637.1KEGG: nmg:Nmag_1429 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like. (409 aa)    
Predicted Functional Partners:
AEH36596.1
KEGG: htu:Htur_3039 nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Rhodanese-like; SMART: Rhodanese-like.
  
 
 0.661
AEH35351.1
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.613
AEH36643.1
KEGG: htu:Htur_3157 beta-lactamase domain protein.
 
 
 0.559
AEH36004.1
PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: hla:Hlac_1260 protein of unknown function DUF395 YeeE/YedE.
  
    0.556
rps17
Ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.552
rpl13
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
 
   0.523
AEH35343.1
KEGG: htu:Htur_2513 beta-lactamase domain protein.
 
 
 0.519
AEH35978.1
KEGG: htu:Htur_0253 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
 
 
 0.487
rpl11
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.
   
   0.467
AEH36003.1
PFAM: SirA-like; KEGG: hla:Hlac_1262 SirA family protein.
  
  
 0.464
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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